Schmeier Group

Computational Biology // Massey University

We analyse genomic, transcriptomic, and epigenetic data from high-throughput experiments to solve biological problems. Please have a look at our research page, our publications, and our tools to get a quick overview of our work.

We are affiliated with the genomics service company NZGL. Feel free to contact us should you be interested in undertaking genomics work. We are happy to discuss feasibility and experimental design, as well as to help analyse your data.

We run free of charge computational workshops. We teach basic computational skills for scientists under the umbrella of the Software and Data Carpentry, as well as more advanced workshops, e.g. in the bioinformatics field.

Contact

Dr. Sebastian Schmeier
Research Group Leader
Senior Lecturer in Bioinformatics/Genomics

Massey University, INMS
Auckland, New Zealand
+64 9 414 0800 (ext: 43538)

Publications // latest

DES-ncRNA: A knowledgebase for exploring information about human micro and long noncoding RNAs based on literature-mining. RNA Biology, 2017, 10.1080/15476286.2017.1312243.

An atlas of human long non-coding RNAs with accurate 5' ends. Nature, 2017, 543:199–204.

TcoF-DB v2: update of the database of human and mouse transcription co-factors and transcription factor interactions. Nucleic Acids Research, 2017, 45(D1): D145-D150, doi: 10.1093/nar/gkw1007

Workshops // upcoming

[ Nov 2017 ] Software Carpentry Workshop, Massey University Auckland

Tweets // latest